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Rhytidome- and cork-type barks of holm oak, cork oak and their hybrids highlight processes leading to cork formation.

The periderm is basic for land plants due to its protective role during radial growth, which is achieved by the polymers deposited in the cell walls. In most trees, like holm oak, the periderm is frequently replaced by subsequent internal periderms yielding a heterogeneous outer bark made of a mixture of periderms and phloem tissues, known as rhytidome. Exceptionally, cork oak forms a persistent or long-lived periderm which results in a homogeneous outer bark of thick phellem cell layers known as cork. Here we use the outer bark of cork oak, holm oak, and their natural hybrids’ to analyse the chemical composition, the anatomy and the transcriptome, and further understand the mechanisms underlying periderm development. The inclusion of hybrid samples showing rhytidome-type and cork-type barks is valuable to approach to cork and rhytidome development, allowing an accurate identification of candidate genes and processes. The present study underscores that biotic stress and cell death signalling are enhanced in rhytidome-type barks whereas lipid metabolism and cell cycle are enriched in cork-type barks. Development-related DEGs, showing the highest expression, highlight cell division, cell expansion, and cell differentiation as key processes leading to cork or rhytidome-type barks

Chan Zuckerberg Iniciative

Autor: Armendariz, Iker
López de Heredia, Unai
Soler, Marçal
Puigdemont, Adrà
Ruiz, Maria Mercè
Jové Martín, Patricia
Soto, Álvaro
Serra i Figueras, Olga
Figueras i Vall-llosera, Mercè
Data: 31 març 2023
Resum: The periderm is basic for land plants due to its protective role during radial growth, which is achieved by the polymers deposited in the cell walls. In most trees, like holm oak, the periderm is frequently replaced by subsequent internal periderms yielding a heterogeneous outer bark made of a mixture of periderms and phloem tissues, known as rhytidome. Exceptionally, cork oak forms a persistent or long-lived periderm which results in a homogeneous outer bark of thick phellem cell layers known as cork. Here we use the outer bark of cork oak, holm oak, and their natural hybrids’ to analyse the chemical composition, the anatomy and the transcriptome, and further understand the mechanisms underlying periderm development. The inclusion of hybrid samples showing rhytidome-type and cork-type barks is valuable to approach to cork and rhytidome development, allowing an accurate identification of candidate genes and processes. The present study underscores that biotic stress and cell death signalling are enhanced in rhytidome-type barks whereas lipid metabolism and cell cycle are enriched in cork-type barks. Development-related DEGs, showing the highest expression, highlight cell division, cell expansion, and cell differentiation as key processes leading to cork or rhytidome-type barks
Format: application/pdf
Accés al document: http://hdl.handle.net/10256/24169
Llenguatge: eng
Editor: Chan Zuckerberg Iniciative
Col·lecció: info:eu-repo/semantics/altIdentifier/doi/10.1101/2023.03.31.535027
info:eu-repo/semantics/altIdentifier/issn/2692-8205
Drets: Reconeixement-NoComercial-SenseObraDerivada 4.0 Internacional
URI Drets: http://creativecommons.org/licenses/by-nc-nd/4.0
Matèria: Creixement (Plantes)
Growth (Plants)
Arbres -- Creixement
Trees -- Growth
Títol: Rhytidome- and cork-type barks of holm oak, cork oak and their hybrids highlight processes leading to cork formation.
Tipus: info:eu-repo/semantics/article
Repositori: DUGiDocs

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